Table A Performance using the f/y[30] score of the full version of PREDITOR, a disabled version of PREDITOR (shift-based predictions only) and TALOS for the test set of 31 proteins, of which 28 are in the TALOS database (reference #21).
BMRB# |
Protein Name
(Source) |
PDB |
% b Sheet |
f/y30 score TALOS |
f/y30 score PREDITOR (shift only) |
f/y30 score PREDITOR (full) |
TALOS Time (s) |
PREDITOR Time (s) |
[21] |
Profilin I
(A.castellani) |
1ACF |
41.1 |
81.1 |
61.39 |
68.3 |
709.80 |
25.2 |
[21] |
FK506
Binding Protein (Human) |
1BKF |
57.9 |
72.4 |
64 |
91.3 |
883.2 |
24.0 |
[21] |
Retinoic
acid binding protein |
1CBS |
61.3 |
69.8 |
65.89 |
85.3 |
1857.00 |
31.2 |
[21] |
Cutinase
(F.solani) |
1CEX |
30.4 |
72.3 |
65.22 |
98.9 |
1405.2 |
44.2 |
[21] |
Calmodulin
(Drosophila) |
1CLL |
12.1 |
85.5 |
90.98 |
82.8 |
963.0 |
28.5 |
[21] |
T Cell Signal Trans. Molecule |
1D4T |
51.0 |
66.7 |
64.08 |
84.5 |
912.0 |
29.4 |
[21] |
D-maltodextrin-binding
protein |
1DMB |
30.1 |
66.4 |
62.61 |
76.8 |
2599.2 |
124.2 |
[21] |
Thioredoxin
- Reduced (Human) |
1ERT |
37.1 |
77.7 |
72.73 |
99.0 |
788.0 |
24.0 |
[21] |
Phosphocarrier protein III (E.coli) |
1F3G |
54.7 |
50.7 |
51.45 |
83.3 |
1035.0 |
25.5 |
[21] |
Carbonic
Anhydrase I (Human) |
1HCB |
53.4 |
59.7 |
53.59 |
97.9 |
1757.4 |
64.2 |
[21] |
HIV
Protease |
1HVR |
69.2 |
71.1 |
65.56 |
83.3 |
642.0 |
12.3 |
[21] |
Fatty acid
binding protein (Rat) |
1ICM |
62.6 |
67.2 |
70.4 |
100.0 |
954.0 |
29.6 |
[21] |
IIb Cellobiose (E. coli) |
1IIBB |
28.2 |
75.3 |
79 |
89.2 |
819.0 |
23.5 |
4084 |
Nuclear
riboprotein A1 (Human) |
1L3K |
50.0 |
60.2 |
60.71 |
60.7 |
600.00 |
21.2 |
5182 |
Glur2
ligand binding core (Rat) |
1M5E |
36.0 |
71.1 |
71.71 |
95.2 |
1942.0 |
69.1 |
[21] |
Thiol Ester Dehydrase (E.coli) |
1MKA |
53.1 |
69.9 |
65.03 |
95.1 |
1006.8 |
33.9 |
[21] |
Plastocyanin
(Poplar) |
1PLC |
65.7 |
62.9 |
61.75 |
91.8 |
953.20 |
29.9 |
[21] |
ColE1 Repressor protein (E.coli) |
1ROP |
0.0 |
93.9 |
93.75 |
91.7 |
381.0 |
11.4 |
[21] |
Staphylococcal
Nuclease |
1SNC |
41.7 |
67.2 |
67.8 |
100.0 |
832.8 |
27.6 |
[21] |
Troponin C
– N domain (Chicken) |
1TOP |
10.6 |
77.4 |
82.91 |
94.2 |
213.80 |
37.2 |
[21] |
Ubiquitin
(Human) |
1UBQ |
52.8 |
78.9 |
78.57 |
85.7 |
571.80 |
22.2 |
[21] |
Histidine-containing
Phosphotransfer Domain of Arcb |
2A0B |
1.7 |
91.4 |
90.68 |
97.5 |
967.80 |
11.9 |
[21] |
Alpha-lytic
protease |
2ALP |
57.6 |
50.9 |
55.49 |
98.9 |
456.00 |
12.9 |
[21] |
Cyclophilin
A (Human) |
2CPL |
43.5 |
58.8 |
57.5 |
97.5 |
1404.0 |
41.1 |
[21] |
Ribonuclease
H (E.coli) |
2RN2 |
39.4 |
66.0 |
66.01 |
98.7 |
1212.0 |
37.5 |
[46] |
Thioredoxin
- Reduced (Human) |
2TRX |
39.8 |
71.7 |
72.64 |
90.6 |
1279.2 |
38.1 |
[21] |
Cyanovirin-N
(N.ellipsosporum) |
3EZM |
62.9 |
59.8 |
51.72 |
98.9 |
808.80 |
25.1 |
[21] |
Lysozyme
(Chicken) |
3LZM |
14.0 |
77.2 |
77.16 |
97.5 |
619.8 |
19.8 |
[21] |
Interleukin
1beta (Human) |
4I1B |
76.0 |
55.7 |
56 |
90.4 |
1293.00 |
39.2 |
[21] |
Calbindin
D9K, minor A form (Pig) |
4ICB |
13.2 |
79.4 |
81.82 |
78.8 |
795.0 |
29.1 |
[21] |
Pancreatic
Trypsin Inhibitor (Cow) |
5PTI |
43.9 |
66.1 |
56.36 |
94.6 |
496.2 |
15.0 |
|
|
Average |
41.65 |
70.1 |
68.2 |
90.3 |
1037.32 |
33.02 |