Comparison of PREDITOR
predictions with PDB-derived angles for Retinoic acid binding protein .
Chemical shifts were obtained from 4186,
Reference structure is 1CBS.
PDB Homologue: 2CBR; BLAST E value= 2e-54; %Seq Identity= 76.64
Res# AA φpred Error φexp ψpred Error ψexp χ1pred Conf χ1exp ωpred ωexp
1 P NONE 31.00 NONE 145.09* 31.00 151.24 26.68* 0.85 32.63 180.00 177.96
2 N -104.57* 31.00 -124.51 109.64* 31.00 100.48 180.00* 0.85 177.14 180.00 -179.63
3 F -92.74* 31.00 -80.00 -9.06* 31.00 -9.88 -60.00* 0.85 -71.77 180.00 -177.41
4 S -62.67* 31.00 -55.62 146.85* 31.00 140.23 180.00* 0.85 -63.59 180.00 177.81
5 G 133.62* 31.00 144.98 -167.18* 31.00 177.20 NONE 0.00 NONE 180.00 176.40
6 N -116.21* 31.00 -104.90 131.27* 31.00 115.75 180.00* 0.85 -66.93 180.00 -175.64
7 W -126.34* 21.00 -107.01 149.21* 21.00 141.04 -60.00* 0.85 -57.51 180.00 179.08
8 K -126.50* 11.00 -119.55 151.42* 11.00 141.93 60.00* 0.85 64.49 180.00 -177.67
9 I -81.58* 11.00 -78.07 129.80* 11.00 144.91 180.00* 0.85 -163.77 180.00 178.44
10 I -91.50* 5.50 -126.01 -37.57* 5.50 -12.23 180.00* 0.85 58.26 180.00 178.43
11 R -167.96* 11.00 -159.03 148.86* 11.00 138.74 60.00* 0.85 176.67 180.00 177.29
12 S -124.77* 11.00 -140.74 153.89* 11.00 127.08 180.00* 0.85 179.20 180.00 179.91
13 E -150.31* 11.00 -128.78 118.36* 11.00 138.02 180.00* 0.85 -57.71 180.00 175.34
14 N 71.15* 11.00 65.46 25.78* 11.00 22.91 -60.00* 0.85 -121.98 180.00 -179.28
15 F -65.28* 5.50 -66.87 -36.41* 5.50 -48.56 180.00* 0.85 -170.86 180.00 179.16
16 E -70.28* 5.50 -61.56 -44.07* 5.50 -39.64 180.00* 0.85 163.12 180.00 179.31
17 E -60.07* 5.50 -60.88 -33.44* 5.50 -36.13 -60.00* 0.85 -70.31 180.00 177.75
18 L -63.71* 5.50 -65.49 -51.07* 5.50 -43.24 180.00* 0.85 177.21 180.00 -179.53
19 L -61.46* 5.50 -65.44 -29.60* 5.50 -32.24 -60.00* 0.85 -64.98 180.00 179.62
20 K -64.57* 5.50 -65.14 -58.87* 5.50 -45.47 -60.00* 0.85 -131.37 180.00 178.81
21 V -49.62* 5.50 -62.26 -29.23* 5.50 -36.01 180.00* 0.85 169.92 180.00 -179.97
22 L -91.58* 31.00 -75.25 3.63* 31.00 -4.55 -60.00* 0.85 -65.39 180.00 177.70
23 G 70.03* 31.00 84.03 37.44* 31.00 20.28 NONE 0.00 NONE 180.00 179.44
24 V -86.49* 31.00 -79.60 138.71* 31.00 130.05 180.00* 0.85 179.82 180.00 -178.10
25 N -55.51* 31.00 -66.99 128.70* 31.00 161.30 180.00* 0.85 77.88 180.00 -177.29
26 V -42.92* 5.50 -47.15 -36.26* 5.50 -52.00 180.00* 0.85 -179.00 180.00 -178.75
27 M -75.12* 5.50 -67.60 -28.85* 5.50 -38.69 -60.00* 0.85 -79.76 180.00 178.90
28 L -74.29* 5.50 -68.85 -42.82* 5.50 -34.05 -60.00* 0.85 -78.39 180.00 178.55
29 R -57.21* 5.50 -63.38 -41.78* 5.50 -44.25 -60.00* 0.85 -86.50 180.00 -179.96
30 K -55.18* 5.50 -54.82 -45.32* 5.50 -47.33 180.00* 0.85 -177.13 180.00 179.88
31 I -69.29* 5.50 -62.94 -50.03* 5.50 -48.56 180.00* 0.85 -63.70 180.00 -178.18
32 A -57.68* 5.50 -61.02 -56.90* 5.50 -48.26 NONE 0.00 NONE 180.00 -179.63
33 V -51.42* 5.50 -59.11 -41.37* 5.50 -41.53 180.00* 0.85 171.14 180.00 179.77
34 A -61.39* 5.50 -65.92 -55.74* 5.50 -45.78 NONE 0.00 NONE 180.00 -179.26
35 A -60.54* 21.00 -68.08 -43.14* 21.00 -36.25 NONE 0.00 NONE 180.00 -178.67
36 A -62.55* 21.00 -73.94 -15.01* 21.00 -8.65 NONE 0.00 NONE 180.00 -179.28
37 S -67.26* 21.00 -76.74 -38.05* 21.00 -14.71 -60.00* 0.85 71.60 180.00 179.93
38 K -116.99* 21.00 -135.78 62.87* 21.00 65.00 -60.00* 0.85 46.06 180.00 -179.91
39 P -85.03* 21.00 -84.30 147.15* 21.00 157.82 43.39* 0.85 35.65 180.00 175.12
40 A -111.94* 21.00 -111.36 129.42* 21.00 121.52 NONE 0.00 NONE 180.00 -179.44
41 V -121.31* 11.00 -119.10 125.57* 11.00 128.10 180.00* 0.85 179.55 180.00 177.93
42 E -113.36* 11.00 -124.85 128.14* 11.00 124.29 180.00* 0.85 174.95 180.00 179.91
43 I -129.50* 11.00 -120.96 121.73* 11.00 134.33 -60.00* 0.85 -60.53 180.00 176.82
44 K -113.26* 21.00 -126.71 131.09* 21.00 121.85 -60.00* 0.85 -62.05 180.00 -179.27
45 Q -131.92* 21.00 -122.22 149.95* 21.00 135.71 180.00* 0.85 175.19 180.00 177.50
46 E -149.72* 11.00 -133.96 85.74* 11.00 90.89 180.00* 0.85 -109.51 180.00 -178.78
47 G 65.01* 11.00 71.20 -130.60* 11.00 -119.15 NONE 0.00 NONE 180.00 179.97
48 D -78.88* 21.00 -101.24 -0.22* 21.00 12.79 -60.00* 0.85 -75.47 180.00 179.63
49 T -86.28* 21.00 -104.01 125.01* 21.00 129.58 180.00* 0.85 -59.76 180.00 -177.40
50 F -127.80* 21.00 -127.84 141.48* 21.00 149.54 -60.00* 0.85 -69.69 180.00 175.30
51 Y -128.27* 21.00 -132.29 123.64* 21.00 124.88 180.00* 0.85 161.57 180.00 -179.79
52 I -133.35* 21.00 -131.08 115.50* 21.00 119.28 -60.00* 0.85 -58.99 180.00 178.67
53 K -109.61* 11.00 -115.15 125.87* 11.00 121.75 180.00* 0.85 -177.85 180.00 179.27
54 T -118.43* 11.00 -118.93 116.90* 11.00 119.01 -60.00* 0.85 -53.78 180.00 -175.91
55 S -118.70* 11.00 -120.48 141.71* 11.00 137.46 -60.00* 0.85 174.30 180.00 176.60
56 T -139.38* 11.00 -140.63 -179.60* 11.00 168.52 60.00* 0.85 68.25 180.00 179.67
57 T -72.46* 5.50 -62.83 -38.72* 5.50 -20.88 -60.00* 0.85 52.09 180.00 -177.91
58 V -96.05* 5.50 -112.39 -8.77* 5.50 -10.45 -60.00* 0.85 -52.76 180.00 -177.71
59 R -164.87* 11.00 -168.97 135.02* 11.00 135.30 180.00* 0.85 175.63 180.00 178.33
60 T -131.97* 11.00 -129.94 131.10* 11.00 134.75 -60.00* 0.85 -69.99 180.00 178.27
61 T -117.51* 11.00 -124.31 138.71* 11.00 144.29 60.00* 0.85 60.57 180.00 177.87
62 E -124.50* 11.00 -133.89 110.61* 11.00 117.20 -60.00* 0.85 -63.28 180.00 179.11
63 I -113.52* 11.00 -118.79 152.10* 11.00 147.44 60.00* 0.85 61.04 180.00 179.24
64 N -139.34* 11.00 -130.40 132.15* 11.00 122.40 180.00* 0.85 -72.06 180.00 179.13
65 F -160.72* 11.00 -149.65 169.51* 11.00 160.94 60.00* 0.85 64.06 180.00 175.99
66 K -125.14* 11.00 -117.82 119.66* 11.00 132.73 180.00* 0.85 170.93 180.00 179.64
67 V -56.25* 11.00 -59.18 126.63* 11.00 130.25 180.00* 0.85 -178.30 180.00 179.59
68 G 106.25* 11.00 91.39 -10.85* 11.00 -2.60 NONE 0.00 NONE 180.00 179.28
69 E -124.29* 21.00 -119.66 127.83* 21.00 127.61 -60.00* 0.85 -68.82 180.00 -178.73
70 E -65.39* 21.00 -62.33 154.57* 21.00 140.69 180.00* 0.85 -170.21 180.00 179.32
71 F -150.54* 11.00 -143.48 171.70* 11.00 174.11 60.00* 0.85 69.32 180.00 -178.62
72 E -108.52* 21.00 -119.36 134.01* 21.00 132.73 -60.00* 0.85 -146.80 180.00 178.04
73 E -148.67* 21.00 -144.94 -165.30* 21.00 -154.28 60.00* 0.85 58.29 180.00 178.68
74 Q -118.75* 21.00 -135.10 156.03* 21.00 153.77 -60.00* 0.85 -72.75 180.00 176.17
75 T -77.28* 21.00 -71.67 179.24* 21.00 171.40 60.00* 0.85 58.98 180.00 -179.61
76 V -64.47* 21.00 -56.88 -33.30* 21.00 -37.13 180.00* 0.85 -159.43 180.00 179.40
77 D -92.57* 31.00 -83.47 24.54* 31.00 6.03 60.00* 0.85 63.24 180.00 176.90
78 G 81.32* 31.00 93.13 -13.32* 31.00 16.91 NONE 0.00 NONE 180.00 -179.70
79 R -62.66* 31.00 -96.87 136.77* 31.00 133.68 -60.00* 0.85 -58.08 180.00 179.72
80 P -78.61* 21.00 -58.40 134.88* 21.00 138.31 -163.94* 0.85 -32.83 180.00 179.70
81 C -139.05* 11.00 -150.03 172.99* 11.00 160.52 60.00* 0.85 64.32 180.00 176.07
82 K -104.41* 21.00 -100.83 125.76* 21.00 129.34 180.00* 0.85 -79.12 180.00 -178.18
83 S -114.50* 21.00 -121.55 145.76* 21.00 152.87 -60.00* 0.85 -69.36 180.00 179.18
84 L -127.51* 21.00 -142.23 87.35* 21.00 117.58 -60.00* 0.85 173.42 180.00 179.82
85 V -72.43* 11.00 -100.52 139.32* 11.00 138.73 60.00* 0.85 -177.31 180.00 178.07
86 K -149.97* 11.00 -136.93 148.03* 11.00 158.93 -60.00* 0.85 -62.38 180.00 176.76
87 W -80.84* 21.00 -84.28 104.89* 21.00 111.88 -60.00* 0.85 -72.26 180.00 176.91
88 E -65.97* 15.50 -73.21 -38.57* 15.50 -40.47 180.00* 0.85 179.98 180.00 177.94
89 S -152.73* 11.00 -147.64 -176.16* 11.00 178.77 60.00* 0.85 60.38 180.00 -178.99
90 E -54.51* 5.50 -53.90 -38.75* 5.50 -37.47 180.00* 0.85 -174.72 180.00 -178.42
91 N -112.48* 5.50 -112.62 14.66* 5.50 15.69 -60.00* 0.85 -60.13 180.00 -177.89
92 K -132.11* 11.00 -137.66 131.71* 11.00 122.26 180.00* 0.85 -179.21 180.00 177.32
93 M -106.94* 11.00 -106.15 130.92* 11.00 142.97 -60.00* 0.85 60.63 180.00 179.10
94 V -110.54* 11.00 -125.62 137.73* 11.00 138.71 180.00* 0.85 175.11 180.00 -179.56
95 C -134.74* 11.00 -122.02 117.38* 11.00 124.54 180.00* 0.85 -179.58 180.00 178.07
96 E -90.82* 11.00 -99.80 142.48* 11.00 132.09 -60.00* 0.85 178.23 180.00 -179.15
97 Q -125.15* 21.00 -114.36 136.94* 21.00 144.92 -60.00* 0.85 -57.70 180.00 -179.39
98 K -126.16* 21.00 -134.21 123.99* 21.00 119.63 60.00* 0.85 155.74 180.00 -179.67
99 L -59.72* 31.00 -60.22 137.65* 31.00 132.16 -60.00* 0.85 -70.37 180.00 179.96
100 L -71.00* 31.00 -67.26 -56.92* 31.00 -37.42 -60.00* 0.85 -69.10 180.00 -179.54
101 K -114.24* 31.00 -144.14 138.18* 31.00 142.56 -60.00* 0.85 -58.34 180.00 178.47
102 G 85.28* 41.00 87.01 -167.01* 41.00 -168.22 NONE 0.00 NONE 180.00 179.64
103 E -141.72* 41.00 -131.99 157.85* 41.00 164.55 60.00* 0.85 -93.71 180.00 179.81
104 G -173.33* 41.00 169.24 -160.78* 41.00 -177.64 NONE 0.00 NONE 180.00 179.69
105 P -68.41* 41.00 -59.30 145.13* 41.00 151.16 -24.29* 0.85 -26.55 180.00 178.27
106 K -71.39* 31.00 -76.94 115.01* 31.00 125.90 -60.00* 0.85 -178.83 180.00 -178.88
107 T -115.75* 21.00 -118.80 156.96* 21.00 155.71 60.00* 0.85 58.75 180.00 177.77
108 S -164.88* 11.00 -161.17 167.34* 11.00 170.54 60.00* 0.85 58.45 180.00 176.68
109 W -141.44* 11.00 -149.03 160.13* 11.00 154.17 60.00* 0.85 61.02 180.00 178.05
110 T -145.12* 11.00 -136.98 131.36* 11.00 150.17 60.00* 0.85 70.65 180.00 176.53
111 R -113.90* 11.00 -134.79 127.49* 11.00 130.23 -60.00* 0.85 -78.51 180.00 -179.60
112 E -127.37* 11.00 -142.51 135.05* 11.00 143.95 180.00* 0.85 66.55 180.00 178.31
113 L -101.24* 11.00 -95.83 112.13* 11.00 122.88 180.00* 0.85 -77.38 180.00 -178.42
114 T -136.80* 11.00 -89.55 113.89* 11.00 168.15 180.00* 0.85 54.87 180.00 -178.39
115 N 60.03* 21.00 -62.09 46.28* 21.00 -23.84 -60.00* 0.85 -76.39 180.00 178.82
116 D 62.61* 31.00 -88.43 14.21* 31.00 4.32 180.00* 0.85 56.31 180.00 178.96
117 G -88.00 40.00 91.41 12.86 42.00 6.20 NONE 0.00 NONE 180.00 180.00
118 E -114.89* 21.00 -95.58 138.42* 21.00 171.54 -60.00* 0.85 -61.48 180.00 -179.49
119 L -98.30* 11.00 -121.88 107.81* 11.00 126.83 180.00* 0.85 175.21 180.00 177.69
120 I -90.84* 11.00 -109.92 113.76* 11.00 123.84 -60.00* 0.85 -61.75 180.00 176.50
121 L -103.25* 11.00 -108.93 136.01* 11.00 129.83 180.00* 0.85 162.58 180.00 174.64
122 T -129.00* 11.00 -121.57 131.19* 11.00 141.69 -60.00* 0.85 77.41 180.00 177.70
123 M -117.91* 11.00 -124.95 126.01* 11.00 135.49 -60.00* 0.85 -68.77 180.00 -177.76
124 T -114.88* 11.00 -124.90 136.65* 11.00 143.70 180.00* 0.85 -60.47 180.00 177.24
125 A -135.94* 11.00 -140.00 90.96* 11.00 107.74 NONE 0.00 NONE 180.00 -176.59
126 D 58.39* 11.00 55.69 -125.85* 11.00 -115.96 -60.00* 0.85 -79.67 180.00 179.86
127 D -70.60* 15.50 -100.26 -23.53* 15.50 2.26 -60.00* 0.85 -98.36 180.00 179.64
128 V -76.71* 21.00 -93.65 135.07* 21.00 129.37 180.00* 0.85 170.30 180.00 -179.40
129 V -127.17* 21.00 -118.39 125.86* 21.00 128.44 180.00* 0.85 -175.63 180.00 177.18
130 C -109.68* 11.00 -103.19 129.27* 11.00 129.91 180.00* 0.85 168.98 180.00 -178.49
131 T -117.47* 11.00 -116.59 122.39* 11.00 123.92 -60.00* 0.85 -55.36 180.00 179.44
132 R -121.78* 11.00 -128.10 119.85* 11.00 136.60 -60.00* 0.85 -38.11 180.00 -177.87
133 V -96.10* 11.00 -120.43 131.99* 11.00 137.52 -60.00* 0.85 -174.82 180.00 -179.13
134 Y -121.33* 11.00 -131.01 151.58* 11.00 162.02 -60.00* 0.85 -50.91 180.00 176.56
135 V -125.53* 11.00 -137.81 154.08* 11.00 151.57 180.00* 0.85 69.25 180.00 179.88
136 R -70.93* 11.00 -67.13 113.58* 11.00 146.13 -60.00* 0.85 -75.14 180.00 -179.55
137 E -65.62* 11.00 -61.51 NONE 11.00 NONE 180.00* 0.85 -74.23 180.00 NONE
Have a problem with PREDITOR or a suggestion? Contact
Mark Berjanskii , Steve Neal ,
or David Wishart .