PREDITOR Help Page:
1. Input file formats:
BMRB,
SHIFTY,
FASTA
2.
Example of PREDITOR output
3.
Table 1. Scaling factors for calculation of PREDITOR similarity score
4.
Table 2. Switch points between shift-based and homology-based PREDITOR predictions.
5.
Table 3a. Relationship between PREDITOR confidence scores and φ/ψ errors for shift-only predictions.
6.
Table 3b. Relationship between PREDITOR confidence scores and φ/ψ errors for predictions with PDB homologues.
7.
Table 4. Confidence levels of χ 1 predictions.
8.
Table 5. Scaling factors to correct the uncertainty of shift-based predictions when NMR assignments are incomplete.
9.
Table 6. PREDITOR database (version 1.0; 141 proteins; built on April 10th, 2006)
10.
Table 7. Comparison of accuracy and speed of dihedral angle predictions by PREDITOR and TALOS for a test set of 15 high-resolution XRAY structures
11.
Table 8. Homology-based scaling factors of global errors.
12.
Table A. Comparison of accuracy and speed of dihedral angle predictions by PREDITOR and TALOS for a training set of 31 proteins
13.
Figure 1. PREDITOR protocol
14.
Figure 2. Effect of β-sheet content on accuracy of PREDITOR predictions
15.
Figure 3. Effect of sequence homology on PDB-based predictions of φ and ψ.
16.
Figure 4. Effect of sequence homology on PDB-based predictions of χ-1.
17.
PREDITOR limitations.